Detailed information of matrix profile MA1359.2

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Profile summary
Name: BPE
Matrix ID: MA1359.2
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 21335373
Uniprot ID: Q0JXE7  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 108 98 90 77 1 396 0 8 0 0 71 72 142 94 ]
C [ 85 81 72 162 393 0 387 0 0 2 87 162 74 110 ]
G [ 108 75 161 85 2 0 0 388 0 393 162 72 79 83 ]
T [ 95 142 73 72 0 0 9 0 396 1 76 90 101 109 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1359.1 MA1359 1 BPE Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1359.2 MA1359 2 BPE Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1359.3 MA1359 3 BPE Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 107.693

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: