Detailed information of matrix profile MA1360.1

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Profile summary
Name: bHLH74
Matrix ID: MA1360.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q6NKN9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 86 36 58 48 49 24 0 198 6 0 0 0 51 25 63 48 45 12 106 38 23 ]
C [ 18 36 42 48 52 32 198 0 191 0 0 5 72 63 48 58 30 124 24 100 47 ]
G [ 11 87 60 38 66 68 0 0 0 198 0 193 49 37 23 32 23 40 30 18 103 ]
T [ 83 39 38 64 31 74 0 0 1 0 198 0 26 73 64 60 100 22 38 42 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1360.1 MA1360 1 bHLH74 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1360.2 MA1360 2 BHLH74 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1360.3 MA1360 3 bHLH74 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: