Detailed information of matrix profile MA1368.2

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Profile summary
Name: GT-4
Matrix ID: MA1368.2
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 20717979
Uniprot ID: Q9LU92  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 146 536 629 3 6 567 23 455 15 15 66 443 323 197 ]
C [ 63 11 3 618 552 33 28 2 9 4 44 37 89 110 ]
G [ 41 36 5 5 1 26 24 181 612 6 20 55 157 130 ]
T [ 396 63 9 20 87 20 571 8 10 621 516 111 77 209 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1368.1 MA1368 1 GT-4 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA1368.2 MA1368 2 GT-4 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA1368.3 MA1368 3 GT-4 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0669.1

ChIP-seq Centrality
-log(P-value): 845.342

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0669.1

ChIP-seq Centrality
-log(P-value): 844.826

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: