Detailed information of matrix profile MA1374.2

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Profile summary
Name: IDD7
Matrix ID: MA1374.2
Class: C2H2 zinc finger factors
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8H1F5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 394 95 400 489 424 528 136 2 575 0 574 576 540 441 ]
C [ 20 224 3 1 49 31 375 0 9 585 0 2 11 25 ]
G [ 153 197 36 0 88 23 57 583 0 0 11 6 29 39 ]
T [ 18 69 146 95 24 3 17 0 1 0 0 1 5 80 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1374.1 MA1374 1 IDD7 Arabidopsis thaliana
C2H2 zinc finger factors
MA1374.2 MA1374 2 IDD7 Arabidopsis thaliana
IDD C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: