Detailed information of matrix profile MA1376.1

  1. Home
  2. Matrix > MA1376.1

Profile summary
Name: DEAR3
Matrix ID: MA1376.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 143 154 149 169 183 41 2 525 1 0 0 568 0 442 255 165 172 ]
C [ 187 128 179 209 78 277 592 0 596 597 0 14 597 131 112 140 90 ]
G [ 76 160 112 84 180 100 1 71 0 0 597 1 0 6 7 61 143 ]
T [ 191 155 157 135 156 179 2 1 0 0 0 14 0 18 223 231 192 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1376.1 MA1376 1 DEAR3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1376.2 MA1376 2 DEAR3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0321.1

ChIP-seq Centrality
-log(P-value): 8741.49

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0321.1

ChIP-seq Centrality
-log(P-value): 8660.22

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: