Detailed information of matrix profile MA1382.1

  1. Home
  2. Matrix > MA1382.1

Profile summary
Name: FAR1
Matrix ID: MA1382.1
Class: GCM domain factors
Family: WRKY-like_FRS/FRF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 18033885
Uniprot ID: Q9SWG3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 171 152 270 193 5 1 4 0 0 0 16 259 224 181 142 ]
C [ 66 82 147 50 0 590 0 591 0 0 17 13 58 97 98 ]
G [ 219 212 62 321 586 0 587 0 591 0 550 193 236 191 117 ]
T [ 135 145 112 27 0 0 0 0 0 591 8 126 73 122 234 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1382.1 MA1382 1 FAR1 Arabidopsis thaliana
WRKY-like_FRS/FRF GCM domain factors
MA1382.2 MA1382 2 FAR1 Arabidopsis thaliana
FRS/FRF GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0341.1

ChIP-seq Centrality
-log(P-value): 1467.79

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0341.1

ChIP-seq Centrality
-log(P-value): 1397.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: