Detailed information of matrix profile MA1392.2

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Profile summary
Name: MYB98
Matrix ID: MA1392.2
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 25215497 25215497
Uniprot ID: Q9S7L2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 391 313 2 8 1004 1011 3 16 29 504 329 ]
C [ 156 182 2 3 6 1 1000 3 83 178 189 ]
G [ 95 117 1015 4 4 1 5 991 378 30 76 ]
T [ 377 407 0 1004 5 6 11 9 529 307 425 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1392.1 MA1392 1 MYB98 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1392.2 MA1392 2 MYB98 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1392.3 MA1392 3 MYB98 Arabidopsis thaliana
MYB Tryptophan cluster factors
     

-log(P-value) = 916.0

TFFM details

TFFM ID: TFFM0850.1

ChIP-seq Centrality
-log(P-value): 1032.06

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0850.1

ChIP-seq Centrality
-log(P-value): 1073.38

TFFM detailed summary logos

Description:

Alias:

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GC Content: