Detailed information of matrix profile MA1402.1

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Profile summary
Name: BPC6
Matrix ID: MA1402.1
Class: BBR/BPC
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15722463
Uniprot ID: Q8L999  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 14 181 12 174 3 181 7 187 0 186 19 187 8 179 25 175 27 161 4 151 28 ]
C [ 1 2 0 0 5 0 0 0 0 0 0 0 2 1 3 5 7 5 10 0 2 ]
G [ 123 2 170 6 168 3 169 1 186 0 168 1 177 6 160 2 142 7 161 19 134 ]
T [ 50 3 6 8 12 4 12 0 2 2 1 0 1 2 0 6 12 15 13 18 24 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1402.1 MA1402 1 BPC6 Arabidopsis thaliana
BBR/BPC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: