Detailed information of matrix profile MA1404.1

Profile summary

Name: BPC1
Matrix ID: MA1404.1
Class: Other
Family: BBR-BPC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15722463
Uniprot ID: Q9SKD0  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

A [ 82 483 8 501 67 500 43 478 39 520 27 518 62 460 54 485 41 508 71 478 73 450 47 436 ]
C [ 18 4 15 0 9 0 17 3 0 6 2 11 9 0 0 0 10 0 2 12 19 15 20 22 ]
G [ 421 29 483 18 448 39 461 44 482 2 508 3 450 56 462 54 467 9 459 35 440 39 427 43 ]
T [ 18 23 33 20 15 0 18 14 18 11 2 7 18 23 23 0 21 22 7 14 7 35 45 38 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.

External links