Detailed information of matrix profile MA1405.1

  1. Home
  2. Matrix > MA1405.1

Profile summary
Name: SIZF2
Matrix ID: MA1405.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: PBM
Validation: 9421523
Uniprot ID: I3NN78  
Source: 24567191
Comment:

Sequence logo

Frequency matrix

         
A [ 88380 264 3329 7440 27813 889 94502 530 2662 23762 ]
C [ 627 78711 918 2953 4720 88717 1251 20496 8331 39343 ]
G [ 8331 20496 1251 88717 4073 2953 918 78711 627 20703 ]
T [ 2662 530 94502 889 63395 7440 3329 264 88380 16191 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1405.1 MA1405 1 SIZF2 Solanum lycopersicum
C2H2 zinc finger factors
MA1405.2 MA1405 2 SIZF2 Solanum lycopersicum
C2H2 C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: