Detailed information of matrix profile MA1406.2

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Profile summary
Name: ATHB-4
Matrix ID: MA1406.2
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11247607
Uniprot ID: P92953  
Source: 28805249
Comment:

Sequence logo

Frequency matrix

         
A [ 9947 90866 98352 473 13246 99294 268 13829 55312 ]
C [ 68409 2806 422 333 40460 76 93 618 1915 ]
G [ 3599 764 228 66 42828 333 1291 3298 40381 ]
T [ 18045 5565 998 99128 3466 297 98348 82255 2392 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1406.1 MA1406 1 ATHB-4 Arabidopsis thaliana
HD-ZIP Homeo domain factors
MA1406.2 MA1406 2 ATHB-4 Arabidopsis thaliana
HD-ZIP Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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