Detailed information of matrix profile MA1411.2

  1. Home
  2. Matrix > MA1411.2

Profile summary
Name: TSAR1
Matrix ID: MA1411.2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Medicago truncatula
Data Type: PBM
Validation: 15448264
Uniprot ID:  
Source: 26589673
Comment:

Sequence logo

Frequency matrix

         
A [ 3300 12545 93404 284 1558 1052 84 228 ]
C [ 5250 87319 16 98016 142 5527 51 91222 ]
G [ 91222 51 5527 142 98016 16 87319 5250 ]
T [ 228 84 1052 1558 284 93404 12545 3300 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1411.1 MA1411 1 TSAR1 Medicago truncatula
Basic helix-loop-helix factors (bHLH)
MA1411.2 MA1411 2 TSAR1 Medicago truncatula
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: