Detailed information of matrix profile MA1427.2

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Profile summary
Name: NAC028
Matrix ID: MA1427.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 27203113
Uniprot ID: Q9SRZ8  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 382 518 166 665 24 128 1067 6 19 12 49 298 370 ]
C [ 197 230 117 138 3 7 48 1281 10 7 34 311 214 ]
G [ 303 189 824 301 9 64 90 2 71 4 1188 212 371 ]
T [ 420 365 195 198 1266 1103 97 13 1202 1279 31 481 347 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1427.1 MA1427 1 NAC028 Arabidopsis thaliana
NAC GCM domain factors
MA1427.2 MA1427 2 NAC028 Arabidopsis thaliana
NAC GCM domain factors
MA1427.3 MA1427 3 NAC028 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 857.716

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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