Detailed information of matrix profile MA1432.1

Profile summary

Name: cre-1
Matrix ID: MA1432.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: CORE
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation: 21980519
Uniprot ID: O59958  
Source: 31133749
Comment: CRE-1 and its homologs have been shown to bind a 5'-SYGGRG-3' consensus motif [14], [15], [64].

Sequence logo

Frequency matrix

A [ 158 240 230 11 0 23 240 5 ]
C [ 261 244 252 489 0 39 0 0 ]
G [ 298 230 376 0 999 872 758 985 ]
T [ 280 284 139 499 0 65 0 8 ]

Binding sites information

No Binding sites available for this model.

External links