Detailed information of matrix profile MA1455.1

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Profile summary
Name: dmrt99B
Matrix ID: MA1455.1
Class: DM-type intertwined zinc finger factors
Family: DMRT factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: HT-SELEX
Validation: 31133749
Uniprot ID: Q9VAI8  
Source: 25779349
Comment: DM proteins bind as dimers. PBM supports the monomer TGTATCAA.

Sequence logo

Frequency matrix

         
A [ 224 164 82 371 279 989 12 829 0 124 23 7 526 360 60 431 445 ]
C [ 128 200 27 260 66 2 933 11 39 10 10 8 39 9 808 142 115 ]
G [ 117 155 825 11 35 4 12 21 26 8 955 4 85 288 38 201 150 ]
T [ 529 479 63 356 618 3 41 137 934 856 10 979 348 341 92 224 289 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1455.1 MA1455 1 dmrt99B Drosophila melanogaster
DMRT factors DM-type intertwined zinc finger factors
MA1455.2 MA1455 2 dmrt99B Drosophila melanogaster
DMRT factors DM-type intertwined zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: