Detailed information of matrix profile MA1467.1

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Profile summary
Name: ATOH1
Matrix ID: MA1467.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22985730
Uniprot ID: Q92858  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 426 944 0 1368 0 181 76 0 0 0 ]
C [ 0 35 1368 0 0 1368 0 0 182 466 ]
G [ 943 296 0 0 1368 0 0 1368 179 171 ]
T [ 0 93 0 0 204 0 1368 0 1008 1368 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1467.1 MA1467 1 ATOH1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1467.2 MA1467 2 Atoh1 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
MA1467.3 MA1467 3 Atoh1 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: