Detailed information of matrix profile MA1491.2

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Profile summary
Name: GLI3
Matrix ID: MA1491.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 2105456
Uniprot ID: P10071  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 4051 9 8515 4 1 8515 1 727 29 8515 551 678 3543 2251 44 2652 ]
C [ 1748 3 365 8515 8515 236 8515 7788 8515 2 7964 633 249 3644 190 2938 ]
G [ 4464 8515 376 0 1 9 0 1 1 53 88 8515 353 332 8515 618 ]
T [ 403 96 1 0 1 88 1 1 17 2 83 154 4971 2288 132 2307 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1491.1 MA1491 1 GLI3 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1491.2 MA1491 2 GLI3 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1491.3 MA1491 3 GLI3 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0859.1

ChIP-seq Centrality
-log(P-value): 238.572

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0859.1

ChIP-seq Centrality
-log(P-value): 216.046

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: