Detailed information of matrix profile MA1524.2

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Profile summary
Name: Msgn1
Matrix ID: MA1524.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 21750544
Uniprot ID: Q9JK54  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 177 138 208 193 363 0 537 460 537 18 1 5 37 104 150 122 ]
C [ 96 92 40 21 128 539 3 8 4 6 2 8 140 113 117 158 ]
G [ 182 217 208 324 46 2 0 52 0 3 531 512 50 205 152 125 ]
T [ 87 95 86 4 5 1 2 22 1 515 8 17 315 120 123 137 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1524.1 MA1524 1 MSGN1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1524.2 MA1524 2 Msgn1 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
MA1524.3 MA1524 3 Msgn1 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 629.153

TFFM details

TFFM ID: TFFM0862.1

ChIP-seq Centrality
-log(P-value): 743.477

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0862.1

ChIP-seq Centrality
-log(P-value): 757.204

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: