Detailed information of matrix profile MA1528.2

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Profile summary
Name: NFIX
Matrix ID: MA1528.2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22456058
Uniprot ID: Q14938  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 314 0 0 459 17346 3453 3525 4455 3262 175 0 0 17346 17346 ]
C [ 63 0 0 17346 1423 7942 5991 3846 5090 0 17346 17346 2386 3397 ]
G [ 1856 17346 17346 0 2300 2529 4769 5920 1890 17346 0 0 231 3912 ]
T [ 17346 0 0 0 1773 3423 3061 3125 7104 1819 0 0 127 4530 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1528.1 MA1528 1 NFIX Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
MA1528.2 MA1528 2 NFIX Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Symbol:

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