Detailed information of matrix profile MA1530.1

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Profile summary
Name: NKX6-3
Matrix ID: MA1530.1
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: A6NJ46  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1601 3753 0 6906 6906 0 626 6906 51 ]
C [ 885 379 701 0 0 0 533 0 2723 ]
G [ 1370 789 0 467 0 0 6753 4562 2731 ]
T [ 3050 6906 6906 0 0 6906 153 0 1400 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1530.1 MA1530 1 NKX6-3 Homo sapiens
NK Homeo domain factors
MA1530.2 MA1530 2 NKX6-3 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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GC Content: