Detailed information of matrix profile MA1537.2

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Profile summary
Name: NR2F1
Matrix ID: MA1537.2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14559106
Uniprot ID: P10589  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 20462 317 468 8 10 33956 33956 33956 13 242 21 37 33956 ]
C [ 436 122 42 465 33956 6 228 48 0 0 751 33956 279 ]
G [ 13494 33956 33956 1340 641 606 3361 2542 33956 33956 1854 1543 6237 ]
T [ 280 767 744 33956 2239 19 2711 41 59 494 33956 4148 720 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1537.1 MA1537 1 NR2F1 Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
MA1537.2 MA1537 2 NR2F1 Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: