Detailed information of matrix profile MA1545.1

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Profile summary
Name: OVOL2
Matrix ID: MA1545.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24735879
Uniprot ID: Q9BRP0  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2802 6626 3246 6848 0 12491 12491 0 0 0 3607 7116 2877 ]
C [ 3872 1793 3395 3448 151 9 0 12491 41 24 450 4568 4556 ]
G [ 3144 5865 2607 5644 13 0 1402 0 12491 12491 1602 1849 1033 ]
T [ 2673 2782 3243 1859 12491 0 0 0 0 3 8885 5375 4025 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1545.1 MA1545 1 OVOL2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1545.2 MA1545 2 OVOL2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0548.1

ChIP-seq Centrality
-log(P-value): 365.489

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0548.1

ChIP-seq Centrality
-log(P-value): 379.39

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: