Detailed information of matrix profile MA1549.1

  1. Home
  2. Matrix > MA1549.1

Profile summary
Name: POU6F1
Matrix ID: MA1549.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26265007
Uniprot ID: Q14863  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 2064 1462 1855 411 615 6413 0 0 6413 1312 ]
C [ 1534 3348 6413 0 5799 298 0 255 10 1930 ]
G [ 1238 3065 851 96 206 0 0 179 273 416 ]
T [ 1577 1972 314 6413 67 0 6413 6413 164 2756 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1549.1 MA1549 1 POU6F1 Homo sapiens
POU domain factors Homeo domain factors
MA1549.2 MA1549 2 POU6F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: