Detailed information of matrix profile MA1558.1

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Profile summary
Name: SNAI1
Matrix ID: MA1558.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26170144
Uniprot ID: O95863  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 6356 9044 311 19982 28 306 568 340 3518 5112 ]
C [ 9894 5306 19982 42 19982 19982 91 275 12989 6410 ]
G [ 4592 10938 0 0 5 517 297 19982 501 3187 ]
T [ 10088 1639 706 38 72 1766 19982 446 6993 5274 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1558.1 MA1558 1 SNAI1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1558.2 MA1558 2 SNAI1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0877.1

ChIP-seq Centrality
-log(P-value): 1798.78

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0877.1

ChIP-seq Centrality
-log(P-value): 1677.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: