Detailed information of matrix profile MA1564.2

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Profile summary
Name: SP9
Matrix ID: MA1564.2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26187067
Uniprot ID: P0CG40  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 566 321 2451 2 211 22 0 39 1192 188 ]
C [ 2451 2451 1127 2451 200 2451 2451 2451 1259 1863 ]
G [ 309 113 56 17 2451 0 0 24 38 191 ]
T [ 518 284 96 9 173 14 30 412 353 588 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1564.1 MA1564 1 SP9 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA1564.2 MA1564 2 SP9 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: