Detailed information of matrix profile MA1600.2

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Profile summary
Name: ZNF684
Matrix ID: MA1600.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25690854
Uniprot ID: Q5T5D7  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1224 1107 3 92 6 61 220 67 10 1259 74 131 19 19 ]
C [ 14 18 0 7 10 63 57 2 25 59 1135 110 9 68 ]
G [ 59 129 1263 1229 1253 1226 9 1221 1236 14 216 11 1253 24 ]
T [ 56 249 0 7 44 3 1012 40 13 9 60 1184 9 1238 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1600.1 MA1600 1 ZNF684 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1600.2 MA1600 2 ZNF684 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: