Detailed information of matrix profile MA1639.1

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Profile summary
Name: MEIS1
Matrix ID: MA1639.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23602564
Uniprot ID: O00470  
Source: ReMap
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 2061 2563 872 152 6459 218 304 609 6504 74 1012 2131 1585 ]
C [ 1261 934 152 61 63 192 33 252 83 218 183 762 1902 ]
G [ 1542 1504 279 6367 87 214 336 3580 69 61 4571 1979 1425 ]
T [ 1872 1735 5433 156 127 6112 6063 2295 80 6383 970 1864 1824 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1639.1 MA1639 1 MEIS1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1639.2 MA1639 2 MEIS1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0894.1

ChIP-seq Centrality
-log(P-value): 6160.29

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0894.1

ChIP-seq Centrality
-log(P-value): 5442.99

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: