Detailed information of matrix profile MA1647.2

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Profile summary
Name: Prdm4
Matrix ID: MA1647.2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 23918801
Uniprot ID: Q80V63  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 316 392 220 220 33 21 202 30 1155 1140 1161 16 223 170 145 137 406 ]
C [ 168 191 275 745 1098 40 37 4 12 10 6 1147 434 184 439 528 225 ]
G [ 483 369 437 76 14 13 203 1141 7 27 9 8 39 715 103 92 321 ]
T [ 214 229 249 140 36 1107 739 6 7 4 5 10 485 112 494 424 229 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1647.1 MA1647 1 PRDM4 Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA1647.2 MA1647 2 Prdm4 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA1647.3 MA1647 3 Prdm4 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 690.0

TFFM details

TFFM ID: TFFM0898.1

ChIP-seq Centrality
-log(P-value): 1764.39

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0898.1

ChIP-seq Centrality
-log(P-value): 1826.47

TFFM detailed summary logos

Description:

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GC Content: