Detailed information of matrix profile MA1665.2

  1. Home
  2. Matrix > MA1665.2

Profile summary
Name: HSFB2A
Matrix ID: MA1665.2
Class: Heat shock factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24477691 24477691
Uniprot ID: Q9SCW4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 219 193 485 15 871 859 94 96 13 5 8 46 453 235 ]
C [ 309 181 82 7 2 4 433 713 2 2 866 390 84 154 ]
G [ 131 82 261 858 2 2 264 32 1 2 4 77 171 292 ]
T [ 228 431 59 7 12 22 96 46 871 878 9 374 179 206 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1665.1 MA1665 1 HSFB2A Arabidopsis thaliana
Heat shock factors
MA1665.2 MA1665 2 HSFB2A Arabidopsis thaliana
Heat shock factors
MA1665.3 MA1665 3 HSFB2A Arabidopsis thaliana
HSF Heat shock factors
     

-log(P-value) = 763.084

TFFM details

TFFM ID: TFFM0901.1

ChIP-seq Centrality
-log(P-value): 936.752

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0901.1

ChIP-seq Centrality
-log(P-value): 973.983

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: