Detailed information of matrix profile MA1666.2

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Profile summary
Name: HSFB2B
Matrix ID: MA1666.2
Class: Heat shock factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9T0D3  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 285 260 212 211 987 17 1257 1247 138 138 31 25 7 77 633 270 ]
C [ 249 174 688 209 83 9 8 6 655 1032 7 8 1274 529 147 236 ]
G [ 186 104 164 144 195 1264 7 4 352 53 5 5 11 151 243 516 ]
T [ 580 762 236 736 35 10 28 43 155 77 1257 1262 8 543 277 278 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1666.1 MA1666 1 HSFB2B Arabidopsis thaliana
Heat shock factors
MA1666.2 MA1666 2 HSFB2B Arabidopsis thaliana
Heat shock factors
MA1666.3 MA1666 3 HSFB2B Arabidopsis thaliana
HSF Heat shock factors
     

-log(P-value) = 2099.38

TFFM details

TFFM ID: TFFM0902.1

ChIP-seq Centrality
-log(P-value): 3526.05

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0902.1

ChIP-seq Centrality
-log(P-value): 3573.89

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: