Detailed information of matrix profile MA1667.3

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Profile summary
Name: HSFC1
Matrix ID: MA1667.3
Class: Heat shock factors
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9LV52  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 73 28 12 34 1476 22 1559 1479 ]
C [ 45 7 1538 765 9 22 1 12 ]
G [ 14 6 15 99 80 1521 9 36 ]
T [ 1448 1539 15 682 15 15 11 53 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1667.1 MA1667 1 HSFC1 Arabidopsis thaliana
Heat shock factors
MA1667.2 MA1667 2 HSFC1 Arabidopsis thaliana
Heat shock factors
MA1667.3 MA1667 3 HSFC1 Arabidopsis thaliana
HSF Heat shock factors
     

-log(P-value) = 2316.38

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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