Detailed information of matrix profile MA1674.2

  1. Home
  2. Matrix > MA1674.2

Profile summary
Name: NAC017
Matrix ID: MA1674.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24045017 24045017
Uniprot ID: Q9XIC5  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 300 274 59 50 738 6 19 6 19 136 266 222 ]
C [ 153 193 6 6 60 978 7 0 9 527 156 240 ]
G [ 284 275 4 24 72 4 92 1 957 116 235 237 ]
T [ 260 255 928 917 127 9 879 990 12 218 340 298 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1674.1 MA1674 1 NAC017 Arabidopsis thaliana
NAC GCM domain factors
MA1674.2 MA1674 2 NAC017 Arabidopsis thaliana
NAC GCM domain factors
MA1674.3 MA1674 3 NAC017 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 1402.43

TFFM details

TFFM ID: TFFM0904.1

ChIP-seq Centrality
-log(P-value): 2022.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0904.1

ChIP-seq Centrality
-log(P-value): 2068.74

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: