Detailed information of matrix profile MA1676.2

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Profile summary
Name: NAC062
Matrix ID: MA1676.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 24914054
Uniprot ID: Q9SCK6  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 150 135 129 94 21 533 520 4 51 507 514 112 147 194 ]
C [ 108 127 78 76 58 2 5 3 26 8 2 203 157 76 ]
G [ 102 106 255 88 35 2 4 528 18 2 4 56 72 91 ]
T [ 180 172 78 282 426 3 11 5 445 23 20 169 164 179 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1676.1 MA1676 1 NAC062 Arabidopsis thaliana
NAC GCM domain factors
MA1676.2 MA1676 2 NAC062 Arabidopsis thaliana
NAC GCM domain factors
MA1676.3 MA1676 3 NAC062 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 364.837

TFFM details

TFFM ID: TFFM0905.1

ChIP-seq Centrality
-log(P-value): 1394.75

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0905.1

ChIP-seq Centrality
-log(P-value): 1359.48

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: