Detailed information of matrix profile MA1678.2

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Profile summary
Name: NTL8
Matrix ID: MA1678.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 24914054
Uniprot ID: Q9XIN7  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 324 245 64 958 912 8 795 957 933 45 220 245 324 ]
C [ 197 165 171 5 12 6 79 4 10 850 468 189 201 ]
G [ 197 175 669 10 42 956 35 3 16 40 96 142 154 ]
T [ 264 397 78 9 16 12 73 18 23 47 198 406 303 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1678.1 MA1678 1 NTL8 Arabidopsis thaliana
NAC GCM domain factors
MA1678.2 MA1678 2 NTL8 Arabidopsis thaliana
NAC GCM domain factors
MA1678.3 MA1678 3 NTL8 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 372.105

TFFM details

TFFM ID: TFFM0906.1

ChIP-seq Centrality
-log(P-value): 1243.89

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0906.1

ChIP-seq Centrality
-log(P-value): 1200.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: