Detailed information of matrix profile MA1707.1

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Profile summary
Name: DMRTA1
Matrix ID: MA1707.1
Class: DM-type intertwined zinc finger factors
Family: DMRT factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17605809
Uniprot ID: Q5VZB9  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2671 2671 342 0 0 2671 1595 0 2671 2671 898 811 ]
C [ 585 587 39 0 15 0 1 2671 512 409 649 582 ]
G [ 650 299 0 2671 4 89 761 5 563 644 325 434 ]
T [ 588 1392 2671 2 2671 771 1076 0 383 1096 1773 1860 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1707.1 MA1707 1 DMRTA1 Homo sapiens
DMRT factors DM-type intertwined zinc finger factors
MA1707.2 MA1707 2 DMRTA1 Homo sapiens
DMRT factors DM-type intertwined zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: