Detailed information of matrix profile MA1720.1

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Profile summary
Name: ZNF85
Matrix ID: MA1720.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28273063
Uniprot ID: Q03923  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 150 62 14 227 219 1 11 569 565 4 4 21 35 145 116 118 ]
C [ 246 38 14 308 27 3 42 3 12 5 571 71 328 153 94 144 ]
G [ 114 34 544 21 15 578 136 5 2 2 5 4 66 73 156 103 ]
T [ 74 450 12 28 323 2 395 7 5 573 4 488 155 213 218 219 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1720.1 MA1720 1 ZNF85 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1720.2 MA1720 2 ZNF85 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0915.1

ChIP-seq Centrality
-log(P-value): 738.773

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0915.1

ChIP-seq Centrality
-log(P-value): 779.914

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: