Detailed information of matrix profile MA1725.1

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Profile summary
Name: ZNF189
Matrix ID: MA1725.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27852650
Uniprot ID: O75820  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 6269 4048 382 229 15233 14976 475 14801 296 3543 9206 4118 3859 ]
C [ 3816 1165 135 181 335 254 14163 414 271 10201 2540 2742 3162 ]
G [ 3923 6205 15192 15342 218 380 919 413 15091 735 3088 4085 5788 ]
T [ 1938 4528 237 194 160 336 389 318 288 1467 1112 5001 3137 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1725.1 MA1725 1 ZNF189 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1725.2 MA1725 2 ZNF189 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0918.1

ChIP-seq Centrality
-log(P-value): 1760.15

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0918.1

ChIP-seq Centrality
-log(P-value): 1221.47

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: