Detailed information of matrix profile MA1729.2

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Profile summary
Name: ZNF680
Matrix ID: MA1729.2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27852650
Uniprot ID: Q8NEM1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 418 1120 5394 4522 43 5681 5479 494 5661 4020 202 ]
C [ 4870 4324 60 17 14 23 13 40 41 808 396 ]
G [ 133 69 208 1116 5691 44 203 5144 39 163 213 ]
T [ 345 253 104 111 18 18 71 88 25 775 4955 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1729.1 MA1729 1 ZNF680 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1729.2 MA1729 2 ZNF680 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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