Detailed information of matrix profile MA1733.1

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Profile summary
Name: ASR3
Matrix ID: MA1733.1
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22236699
Uniprot ID: Q8VZ20  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 219 154 497 871 105 0 130 0 715 250 285 219 229 177 ]
C [ 78 32 0 10 0 0 0 579 102 285 159 88 124 240 ]
G [ 78 165 28 104 895 1000 810 0 0 120 83 130 182 189 ]
T [ 624 649 474 15 0 0 60 421 184 344 472 563 466 394 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1733.1 MA1733 1 ASR3 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA1733.2 MA1733 2 ASR3 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: