Detailed information of matrix profile MA1734.1

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Profile summary
Name: AT1G19040
Matrix ID: MA1734.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 20935069
Uniprot ID: A0JQ66  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 341 558 590 5 0 0 38 196 341 177 317 260 28 1000 861 0 ]
C [ 0 5 79 993 0 0 14 286 93 177 317 208 919 0 139 0 ]
G [ 12 146 272 0 224 0 948 351 418 513 127 344 33 0 0 1000 ]
T [ 647 291 59 2 776 1000 0 167 148 133 239 188 21 0 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1734.1 MA1734 1 AT1G19040 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: