Detailed information of matrix profile MA1739.1

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Profile summary
Name: BHLH122
Matrix ID: MA1739.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24261563
Uniprot ID: Q9C690  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 353 233 229 0 998 998 0 0 13 0 270 290 325 415 ]
C [ 114 132 137 998 0 2 5 0 0 0 355 270 243 201 ]
G [ 248 281 506 0 0 0 995 0 436 988 209 75 229 137 ]
T [ 285 353 127 2 2 0 0 1000 551 12 166 365 203 246 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1739.1 MA1739 1 BHLH122 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1739.2 MA1739 2 BHLH122 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0926.1

ChIP-seq Centrality
-log(P-value): 725.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0926.1

ChIP-seq Centrality
-log(P-value): 711.583

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: