Detailed information of matrix profile MA1742.1

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Profile summary
Name: BZIP18
Matrix ID: MA1742.1
Class: Basic leucine zipper factors (bZIP)
Family: Group I
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 23942522
Uniprot ID: O22873  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 90 0 524 0 1000 15 0 0 94 166 219 ]
C [ 102 0 471 1000 0 0 851 219 111 0 238 ]
G [ 64 894 5 0 0 985 95 2 549 499 214 ]
T [ 744 106 0 0 0 0 54 779 246 335 328 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1742.1 MA1742 1 BZIP18 Arabidopsis thaliana
Group I Basic leucine zipper factors (bZIP)
MA1742.2 MA1742 2 BZIP18 Arabidopsis thaliana
Group I Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: