Detailed information of matrix profile MA1743.1

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Profile summary
Name: BZIP2
Matrix ID: MA1743.1
Class: Basic leucine zipper factors (bZIP)
Family: Group S
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9680995
Uniprot ID: Q9SI15  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 318 392 265 26 219 75 0 1000 0 2 0 0 0 202 639 ]
C [ 106 111 57 2 604 77 127 0 991 3 0 0 0 788 111 ]
G [ 296 180 101 789 152 0 803 0 0 995 0 1000 783 2 134 ]
T [ 279 317 577 183 24 848 70 0 9 0 1000 0 217 9 116 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1743.1 MA1743 1 BZIP2 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
MA1743.2 MA1743 2 BZIP2 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: