Detailed information of matrix profile MA1747.2

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Profile summary
Name: DOF4.3
Matrix ID: MA1747.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SUB0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 434 1000 1000 1000 0 302 578 188 3 0 2 0 407 ]
C [ 64 0 0 0 0 178 2 147 995 5 0 2 66 ]
G [ 116 0 0 0 1000 91 345 571 0 0 0 0 103 ]
T [ 386 0 0 0 0 429 76 95 2 995 998 998 424 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1747.1 MA1747 1 DOF4.3 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1747.2 MA1747 2 DOF4.3 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: