Detailed information of matrix profile MA1755.1

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Profile summary
Name: GATA4
Matrix ID: MA1755.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 27203113
Uniprot ID: O49743  
Source: 23795294
Comment:

Sequence logo

Frequency matrix

         
A [ 287 181 438 164 939 42 34 140 359 286 ]
C [ 250 300 167 62 3 16 739 256 160 177 ]
G [ 177 160 256 739 16 3 62 167 300 250 ]
T [ 286 359 140 34 42 939 164 438 181 287 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1755.1 MA1755 1 GATA4 Arabidopsis thaliana
C4-GATA-related Other C4 zinc finger-type factors
MA1755.2 MA1755 2 GATA4 Arabidopsis thaliana
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0928.1

ChIP-seq Centrality
-log(P-value): 249.636

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0928.1

ChIP-seq Centrality
-log(P-value): 259.701

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: