Detailed information of matrix profile MA1756.1

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Profile summary
Name: GRF9
Matrix ID: MA1756.1
Class: CH3
Family: GRF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22942381
Uniprot ID: Q8S9M3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 185 109 337 380 261 228 152 109 0 0 98 1000 0 815 522 ]
C [ 120 239 130 239 120 304 207 98 1000 0 0 0 1000 43 185 ]
G [ 217 413 163 250 163 130 163 33 0 33 902 0 0 109 130 ]
T [ 478 239 370 130 457 337 478 761 0 967 0 0 0 33 163 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1756.1 MA1756 1 GRF9 Arabidopsis thaliana
GRF CH3
MA1756.2 MA1756 2 GRF9 Arabidopsis thaliana
GRF C3H zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: