Detailed information of matrix profile MA1757.1

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Profile summary
Name: HDG7
Matrix ID: MA1757.1
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 16778018
Uniprot ID: Q9LTK3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 273 30 1000 0 0 790 995 463 10 453 175 ]
C [ 10 903 0 0 0 3 0 0 0 15 383 ]
G [ 453 0 0 0 0 8 5 0 70 395 88 ]
T [ 265 68 0 1000 1000 200 0 538 920 138 355 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1757.1 MA1757 1 HDG7 Arabidopsis thaliana
HD-ZIP Homeo domain factors
MA1757.2 MA1757 2 HDG7 Arabidopsis thaliana
HD-ZIP Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: