Detailed information of matrix profile MA1758.2

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Profile summary
Name: HSFA1E
Matrix ID: MA1758.2
Class: Heat shock factors
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9SCW5  
Source: ReMap
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 108 9 11 0 855 0 950 833 165 89 30 0 2 35 ]
C [ 87 7 980 108 13 33 11 11 204 588 26 13 987 236 ]
G [ 30 7 7 39 85 965 0 33 421 200 4 0 0 67 ]
T [ 774 978 2 852 48 2 39 124 210 124 939 987 11 662 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1758.1 MA1758 1 HSFA1E Arabidopsis thaliana
Heat shock factors
MA1758.2 MA1758 2 HSFA1E Arabidopsis thaliana
HSF Heat shock factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: