Detailed information of matrix profile MA1759.1

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Profile summary
Name: HSFA4A
Matrix ID: MA1759.1
Class: Heat shock factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8689565
Uniprot ID: O49403  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 227 237 285 541 154 796 805 122 107 97 8 3 5 896 10 985 853 195 331 ]
C [ 200 316 204 93 72 75 28 189 576 18 5 988 73 7 8 0 35 135 376 ]
G [ 140 199 172 235 689 78 45 482 185 17 0 0 28 90 970 8 28 543 160 ]
T [ 432 249 339 130 85 50 122 207 132 868 987 8 893 7 12 7 83 127 134 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1759.1 MA1759 1 HSFA4A Arabidopsis thaliana
Heat shock factors
MA1759.2 MA1759 2 HSFA4A Arabidopsis thaliana
HSF Heat shock factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: