Detailed information of matrix profile MA1760.1

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Profile summary
Name: HSFA6A
Matrix ID: MA1760.1
Class: Heat shock factors
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q1PDN3  
Source: ReMap
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 80 0 3 0 931 0 994 849 183 111 46 17 0 ]
C [ 54 0 997 77 17 0 0 0 197 574 0 0 997 ]
G [ 31 0 0 6 51 1000 0 34 323 234 3 0 0 ]
T [ 834 1000 0 917 0 0 6 117 297 80 951 983 3 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1760.1 MA1760 1 HSFA6A Arabidopsis thaliana
HSF Heat shock factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0929.1

ChIP-seq Centrality
-log(P-value): 555.912

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0929.1

ChIP-seq Centrality
-log(P-value): 560.014

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: